This method of sample
preparation produces a uniformlayer of very small crystals on the mass
spectrometer's sample stage that are mechanically well adhered to the
substrate.It is a variant of the dried droplet method [23].The crystals
can be th oroughly washed without removing them from the surface.This
effect is achieved by creating an activated layer of matrix on the
surface of the substrate,which acts as an extended seeding site for
growing matrix crystals.A droplet is then dried onto th is activated
surface,resulting in a thin film of protein-doped matrix crystals
attached to the surface.The film grows rapidly,so it is not necessary to
wait until the droplet is dry before washing the film,reducing effects
caused by increasing contam inant concentrations as the droplet
dries.The recipe given below results in reproducible polycrystalline
films for most matrices,although it can be difficult to use gentisic
acid because of its high solubility in water.The method has been shown
to gi ve useful signals from solvents containing as much as 50% glycerol
or 4 M urea.
First,prepare two
solutions containing the matrix at room temperature,referred to below as
Solution A and Solution B.Handle these solutions carefully: it is
important to minimize transfer of undissolved crystalline solid from one
step to the next.Prepare the solutions fresh each day.
Solution
A contains the matrix alone.Prepare it using 0.3 ml of acetonitrile or
any appropriate solvent mixture.Saturate the solvent with matrix in a
0.5 ml Eppendorf tube and swirl for at least one minute with a vortex
mixer.Spin the tube in a benc h-top centrifuge to deposit undissolved
matrix particles on the bottom of the tube.Remove the supernatant to
another tube.
Prepare Solution B
by saturating 0.3 ml of the selected solvent mixture with matrix and
then remove excess matrix particles by centrifugation.Mix an aliquot of
this matrix-saturated solution with a protein-containing solution to
produce a final protein concentration of approximately 1 micromolar.It
is important to remember that the solvent produced by mixing the
protein-containing solution and the matrix-containing solution must keep
both the matrix and the protein in solution.Precipitating either s
olute leads to poor mass spectra.
To
make the sample deposit,first place 0.5 - 1 microliters of Solution A
on the mass spectrometer's sample stage and allow it to dry.Place a
clean glass slide onto the deposit and press down on it with an elastic
rod,such as a pencil eraser.Twist th e glass slide several times to
smear the deposit onto the surface and then remove the slide.Brush the
crushed matrix with a tissue to remove any loose matrix particles.The
layer of crushed matrix serves as the "activated" seeding site for the
drying d roplet (see below).Alternatively,an activated layer can be made
by electrospraying Solution A onto the sample stage,being careful that
the sprayed layer does not become wet during the spray
process.Electrospraying is a bit more difficult than simply crushing
crystals,but the results are good and may be worth the trouble for
particularly contaminated samples.
Apply
0.5 - 1 microliters of Solution B to the spot bearing the smeared
matrix material.An opaque film forms over the substrate's surface below
the droplet within a few seconds,covering the metal.After about one
minute,the probe tip can be immersed in room temperature water to remove
involatile solvents and other contaminants.It is not necessary to let
the droplet dry before washing: the film does not wash off easily.Remove
excess water and allow it to dry before loading into the mass spectrome
ter.
The
aliquot of Solution B used to create the film must be free of
particulate matter.Any particles of matrix present in this solution
result in rapid nucleation of matrix crystals throughout the
solution,interfering with the formation of the film.If Solution B is
obviously cloudy,further centrifugation is necessary to clear the
liquid.